PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G35260.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GeBP
Protein Properties Length: 317aa    MW: 34600.9 Da    PI: 4.4881
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G35260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57349.21.4e-15135226298
           DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfk.vsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                      +f+r+ws eDe+ +L +l   + ++g  +   +da++ ++ +s++ + + +++l  K+  LK++++   kk  +g+    sk hd+  ++lsk+
  OGLUM02G35260.1 135 AFHRIWSTEDEVRILEALAAHRREHG--SLPQTDALIATLAGSLDNTgYGRKELQGKVSTLKRRYESTAKK--KGDL--PSKGHDRRLYDLSKS 222
                      699******************99999..678899**********8653899******************99..5554..5799*********** PP

           DUF573  95 iWgs 98 
                      +Wgs
  OGLUM02G35260.1 223 VWGS 226
                      **95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MAPKRPTPPP PPPPPVASSE ETASGSDSDE SEEEEESPLV QPAPVVSNKG AESDSSGEEE  60
SEEEEEEEDL VRSSATKSRD PPQENREEDD SSDEEEDESS ESEKAEAPPP PPLNPAPKQG  120
AEGNGPKVSS PKRQAFHRIW STEDEVRILE ALAAHRREHG SLPQTDALIA TLAGSLDNTG  180
YGRKELQGKV STLKRRYEST AKKKGDLPSK GHDRRLYDLS KSVWGSEAAA AAANGTTTAP  240
REFGEMCELY PHLAEEVKLL EAAHPGLFKR DFGKLDDDKA HALDMKIKKQ RIAEISVVLR  300
RGDLTKEVTK VLTELVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66420.16e-09GeBP family protein