PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G34320.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

ERF

Protein Properties

Length: 558aa MW: 59082.8 Da PI: 5.8522

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G34320.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.9	2.2e-17	33	82	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g OGLUM02G34320.1 33 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 82 69**998.******9...336**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MVKSGQEAAP GSGGNAAAAA ARQGGGGGGR GRQYKGVRMR SWGSWVSEIR APNQKTRIWL 60 GSYSTAEAAA RAYDAALLCL KGSAADLNFP VHLPFHIPAA AMSPKSIQRV AAAAAANATS 120 PLQHHSGAAS FATATGGYNP AAAPTTPPCS YGDMSSCSAV SSPETANYYG ADHDMVARED 180 DVDYAALADI DAFFQSPKCM DYSMMDPCST FFSPAPESLA AEWEDEASHP NPRGRDSLAF 240 ALLVSFLPSA AAAAAARAMG YTKEQLLARL QELNIEFSCY DHPVVLTVEE QAKHVGHLGG 300 ALSKNLLLKR LGLGKGGLRM APEENLLEVL QVPLGCVTPF ALLNESASFF HGYAIAFLTD 360 SYNCVFASSA VSLLLDQALS SSNLDKFLMS IGRQPAYVDL EASPVVGKDN PPDLADLVPS 420 GVPKSAEPIE KVTPTNVPRQ NDVPKEKTCL PEVKAKPKVQ NKGAEKTQSK IPTNGANVEK 480 FVNDVFDIMS PLFLSEVSKK LNVKQEELSS IFDGFKEQAT IDLESVTTSL KNAAYTAGFE 540 AGFETMLNSG LKGQASRK

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MVKSGQEAAP GSGGNAAAAA ARQGGGGGGR GRQYKGVRMR SWGSWVSEIR APNQKTRIWL  60
GSYSTAEAAA RAYDAALLCL KGSAADLNFP VHLPFHIPAA AMSPKSIQRV AAAAAANATS  120
PLQHHSGAAS FATATGGYNP AAAPTTPPCS YGDMSSCSAV SSPETANYYG ADHDMVARED  180
DVDYAALADI DAFFQSPKCM DYSMMDPCST FFSPAPESLA AEWEDEASHP NPRGRDSLAF  240
ALLVSFLPSA AAAAAARAMG YTKEQLLARL QELNIEFSCY DHPVVLTVEE QAKHVGHLGG  300
ALSKNLLLKR LGLGKGGLRM APEENLLEVL QVPLGCVTPF ALLNESASFF HGYAIAFLTD  360
SYNCVFASSA VSLLLDQALS SSNLDKFLMS IGRQPAYVDL EASPVVGKDN PPDLADLVPS  420
GVPKSAEPIE KVTPTNVPRQ NDVPKEKTCL PEVKAKPKVQ NKGAEKTQSK IPTNGANVEK  480
FVNDVFDIMS PLFLSEVSKK LNVKQEELSS IFDGFKEQAT IDLESVTTSL KNAAYTAGFE  540
AGFETMLNSG LKGQASRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21910.1	4e-26	ERF family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G34320.1