PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G29720.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 288aa MW: 31390.5 Da PI: 8.9696

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G29720.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107	1e-33	31	85	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LHerFveav++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl OGLUM02G29720.1 31 KPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRL 85 79****************************************************8 PP
2	Myb_DNA-binding	69.7	4.9e-22	33	84	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++v+av++lGg+ t+k++ r mg kg+tl+++ks++qky+ OGLUM02G29720.1 33 RLRWTPDLHERFVEAVTKLGGPdkaTPKSVLRLMGmKGLTLYHLKSHLQKYR 84 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MFEGMERAGY GVGVGGAGAV GAGVVLSRDP KPRLRWTPDL HERFVEAVTK LGGPDKATPK 60 SVLRLMGMKG LTLYHLKSHL QKYRLGKQNK KDTGLEASRG AFAAHGISFA SAAPPTIPSA 120 ENNNAGETPL ADALRYQIEV QRKLHEQLEV QKKLQMRIEA QGKYLQTILE KAQNNLSYDA 180 TGTANLEATR TQLTDFNLAL SGFMNNVSQV CEQNNGELAK AISEDNLRTT NLGFQLYHGI 240 QDSDDVKCSQ DEGLLLLDLN IKGGGYDHLS SNAMRGGESG LKISQHRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	2e-64	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G29720.1