PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM02G26080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | TCP | ||||||||
Protein Properties | Length: 83aa MW: 9567.05 Da PI: 12.2635 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 91.3 | 2e-28 | 34 | 83 | 3 | 52 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLl 52 +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG++++++t++WLl OGLUM02G26080.1 34 PKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSNGETVQWLL 83 6999*********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence |
MRAHAARERI RYQQQQMQVA AAVTGERRMQ GLGPKRSSNK DRHTKVDGRG RRIRMPALCA 60 ARIFQLTREL GHKSNGETVQ WLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 5e-30 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM02G26080.1 |