PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G22030.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 374aa MW: 40355.5 Da PI: 7.2026

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G22030.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172	1.9e-53	38	164	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGfrFhPtdeel+++yL +k+++ +++++ e+d++k+ePwdLp++++ +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkd+e+++ OGLUM02G22030.1 38 LPPGFRFHPTDEELITHYLLRKAADPAGFAARAVGEADLNKCEPWDLPSRATMGEKEWYFFCVKDRKYPTGLRTNRATESGYWKATGKDREIFR 131 79*******************9999666689***********988899************************************ PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg+kktLvfy+grap+g kt Wvmheyr+ OGLUM02G22030.1 132 -GKALVGMKKTLVFYTGRAPRGGKTGWVMHEYRI 164 .99***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MRLARQQQQQ VVVAATMEHD VHHHRQMMQQ QQQQEMDLPP GFRFHPTDEE LITHYLLRKA 60 ADPAGFAARA VGEADLNKCE PWDLPSRATM GEKEWYFFCV KDRKYPTGLR TNRATESGYW 120 KATGKDREIF RGKALVGMKK TLVFYTGRAP RGGKTGWVMH EYRIHGKHAA ANSKQDQEWV 180 LCRVFKKSLE LAAAAAAAGR RGAGAGTDVG PSSMPMADDV VGLAPCALPP LMDVSGGGGG 240 AGTASLSATA GAAAAPPPAH VTCFSNALEG QFLDTPYLLP AADPADHLAM SSASPFLEAL 300 QMQYVQDAAA AGGAGMVHEL LMGGGWYCNK GERERLSGAS QDTGLTSSEV NPGEISSSSR 360 QQRMDHHDAS LWAY

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MRLARQQQQQ VVVAATMEHD VHHHRQMMQQ QQQQEMDLPP GFRFHPTDEE LITHYLLRKA  60
ADPAGFAARA VGEADLNKCE PWDLPSRATM GEKEWYFFCV KDRKYPTGLR TNRATESGYW  120
KATGKDREIF RGKALVGMKK TLVFYTGRAP RGGKTGWVMH EYRIHGKHAA ANSKQDQEWV  180
LCRVFKKSLE LAAAAAAAGR RGAGAGTDVG PSSMPMADDV VGLAPCALPP LMDVSGGGGG  240
AGTASLSATA GAAAAPPPAH VTCFSNALEG QFLDTPYLLP AADPADHLAM SSASPFLEAL  300
QMQYVQDAAA AGGAGMVHEL LMGGGWYCNK GERERLSGAS QDTGLTSSEV NPGEISSSSR  360
QQRMDHHDAS LWAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	4e-85	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G22030.1