PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM02G17700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 24019.9 Da PI: 8.6427 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.8 | 2.2e-12 | 87 | 128 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ gt eeAa+++++a+ OGLUM02G17700.1 87 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAARLYDRAAF 128 79**98..47*********4.....5********************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MTRKDSLPVD FPKPSDNENS VEVAHPNIKP FSVHPLPLTK NSDVLLESSN GSDSLKEEKN 60 HYYPGKEIKR RKRHRRKQYV DQEPCIMRGV YFKNMKWQAA IKVDKKQIHL GTVGTQEEAA 120 RLYDRAAFMC GREPNFELSE EEKKELQNYT WKDFLDMTRD TITSKKQRKV GLIRRNKTDS 180 LVGQSDGDTE MINGGGSSHS EDGDAETSAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 5e-47 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM02G17700.1 |