PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G11500.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 299aa MW: 31904.4 Da PI: 4.9169

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G11500.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.5	1.1e-16	143	194	4	58
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +kr rr+ +NRe+ArrsR+RK+a ++ Le+ v++L +eN +L k+l + ++ OGLUM02G11500.1 143 VKRMRRMVSNRESARRSRKRKQAHLADLETQVDQLRGENASLFKQLT---DANQQ 194 79**************************************9995554...44443 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MKKCPSELDF EAFFHGERGE DDADAAADQK PGGGPHPPPF AMFSTADLSS FGFADSVTQS 60 TITGVIPNHI WPQSQSLNAR HPAVYTIESQ SSICAAASPT SATTLNMKES QTLGGTSGSD 120 SDSESLLDIE GGPCEQSTNP LDVKRMRRMV SNRESARRSR KRKQAHLADL ETQVDQLRGE 180 NASLFKQLTD ANQQFTTAVT DNRILKSDVE ALRVKVKMAE DMVARGALSC GLGHLGGLSP 240 ALNPRQGACR VPDVLTGLDY AGDDPFTGLS PPEQVQMPGG GEVGDAWGWD NHSNGAMSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	163	RRSRKRK
2	157	164	RRSRKRKQ
3	159	164	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	7e-40	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G11500.1