PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM02G09790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bHLH | ||||||||
Protein Properties | Length: 183aa MW: 18749.9 Da PI: 9.8167 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.8 | 0.00011 | 20 | 66 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + Er RR+++N+ ++ L +l a + + + L A eYI++ q OGLUM02G09790.1 20 KTTERIRREQMNKLYSHLDSLGGAA---AAAAATRPDRLGVAAEYIRQTQ 66 568*****************99998...7888888888999999999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MEIPPPSAGG GGGGGKPDRK TTERIRREQM NKLYSHLDSL GGAAAAAAAT RPDRLGVAAE 60 YIRQTQERVD MLREKKRELT GGGGGGSSSS SGAGAATAAA PEVEVQHLGS GLHAILVTGA 120 PPTDGASFHR AVRAVEDAGG QVQNAHFSVA GAKAVYTIHA MIGDGYGGIE RVVQRLKEAI 180 RSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 3e-16 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM02G09790.1 |