PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM02G06860.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 196aa MW: 20740.2 Da PI: 8.2201 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.2e-19 | 15 | 65 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +gr++AeIrdp k++r++lg++++ae+Aa+a++aa+++l+g+ OGLUM02G06860.1 15 RFRGVRKRP-WGRYAAEIRDPA---KKARVWLGTYDSAEDAARAYDAAARALRGA 65 69*******.**********83...36*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MRRGGAEEED AEAARFRGVR KRPWGRYAAE IRDPAKKARV WLGTYDSAED AARAYDAAAR 60 ALRGAKAKTN FPLSLPHAQP QLHHHHLTYP AAAVVAARPA TSSLSSTVES FGTRPRPVLP 120 RRPPPPPSIP DGDCRSDCGS SASVVDDDCA DAAASPSCRL PFQFDLNLPP GGGGGGGGGV 180 GCAYDDEELR LTALRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 5e-12 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM02G06860.1 |