PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G05620.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 285aa MW: 30108.4 Da PI: 5.148

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G05620.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.6	1e-16	130	181	4	58
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +kr rr+ +NRe+ArrsR+RK+a ++ Le v++L +eN +L k +l++ ++ OGLUM02G05620.1 130 VKRVRRMVSNRESARRSRKRKQAHLADLESQVDQLRGENASLFK---QLTDANQQ 181 79**************************************9995...55555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MKKCPSELDI VAFIHGGSGG GDADADHPLG IFSAADLSGF GFADSSTITG GIPNHIWPQS 60 QNLNARHPAV STTIESQSSI CAAASPTSAT NLNMKESQTL GGTSGSDSES ESLLDIEGGP 120 CEQSTNPLDV KRVRRMVSNR ESARRSRKRK QAHLADLESQ VDQLRGENAS LFKQLTDANQ 180 QFTTSVTDNR ILKSDVEALR VKVKMAEDMV ARGALSCGLG HLGGLSPALN PRQACRVPDV 240 LAGLDYAGDD PFTAGLSPPE QLQMPGGEVV DAWGWDNHPN GGMSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	144	150	RRSRKRK
2	144	151	RRSRKRKQ
3	146	151	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	2e-37	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G05620.1