PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G39380.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 356aa    MW: 37629.5 Da    PI: 5.7997
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G39380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.62.2e-22137198258
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSS..TTEEEEEEES--SS CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaed..pkvveitYegeHnh 58 
                      dDgy+WrKYGqK++++++fprsYYrC+++   +Cp++k+v++ + d  p + +++Y+ eH++
  OGLUM01G39380.1 137 DDGYQWRKYGQKKINNTNFPRSYYRCSYHrerRCPAQKHVQQRDGDdvPALHVVVYTHEHTC 198
                      8***************************99999*******99887645678899******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MQAQSRLAAA ASGGGGSGIS GSGGISRLSG GAGEEHEAVV RELTRGHELT ARLRAEALRA  60
LRGQGQAEAT ATFILGEVSH AFTVCLSIMA SASPSASPPQ PDETPPADSA VSPPPPPRAA  120
REDNVPRKRL LTASPYDDGY QWRKYGQKKI NNTNFPRSYY RCSYHRERRC PAQKHVQQRD  180
GDDVPALHVV VYTHEHTCLQ GAPAELPDAA TNGGAAAAAS PDYFPAGGET PSSLRRLRGV  240
GGGGLQPQFV DHRAAMEERE RQVLVSSLAR VLQGRQCYDD DDTDVASLGA VHARAPAAAA  300
PVAASSSSSG PVDAAGEELD VMDYDMTDTL FWGPFGTDSN SYDGNLTSTR CFDLIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.27e-18WRKY family protein