PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM01G20910.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 419aa    MW: 47803.5 Da    PI: 5.2164
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM01G20910.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM92.28.6e-291242613127
              NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevls 94 
                      pG+rF P+d el+ ++L++k++g++l+  + ++ +d+y+ +P++L +k+   +e +wy Fs+r++ky++gkr++r+t   g+Wk+t k+++vl+
  OGLUM01G20910.1 124 PGIRFVPSDIELILDFLRPKLRGEQLPSYSYMHVCDVYSDHPKELTSKLGPsREGNWYMFSPRNRKYNKGKRPSRSTGqLGFWKSTTKNEAVLD 217
                      9***************************999**************9655541556********************66538*************9 PP

              NAM  95 k..kgelvglkktLvfy.........kgrapkgektdWvmheyr 127
                      +  ++ l+g k  L+++         k +++++ kt W m e+ 
  OGLUM01G20910.1 218 AlsDNMLIGYKACLTYHeydesmptpKLKKENAIKTPWKMWEFV 261
                      9888889**********8887777766899999*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MAESSESAWP QQSQQLQISS TMPAGSAWPE EENLENLEQP LLLLMPSSED HREQQLVPVP  60
WLQQDQDQEW HEQEQFLLLP WLHQDQEWHE QEQFLPLKNQ NQEQLQDQQP LQDQEETRRY  120
LGVPGIRFVP SDIELILDFL RPKLRGEQLP SYSYMHVCDV YSDHPKELTS KLGPSREGNW  180
YMFSPRNRKY NKGKRPSRST GQLGFWKSTT KNEAVLDALS DNMLIGYKAC LTYHEYDESM  240
PTPKLKKENA IKTPWKMWEF VCSNSNRPFD AEEEPMRLND WVLCKVTNKD NKVTTKKFKP  300
QRSKKPKKPK KLQQEEQPQN QGIVIRQPSE SGSASSSHQE IPGSSLPGAG GDAAAAAATA  360
AAVVDPMPLH MIPPSSWNYF STGVTADGIV MDDSTGVDSY GCVDGAGALN FARNIFYHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.12e-20NAC family protein