PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OGLUM01G14390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | MYB | ||||||||
Protein Properties | Length: 320aa MW: 33884.4 Da PI: 5.4688 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.1 | 1.5e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEde+l++++++ G g W++ ++ g+ R++k+c++rw +yl OGLUM01G14390.1 14 RGRWTKEEDEKLARYIRENGEGAWRSMPKNAGLLRCGKSCRLRWINYL 61 8*******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.2 | 2.9e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E+++++++++ lG++ W++Ia +++ gRt++++k++w+++l OGLUM01G14390.1 67 RGNISPQEEDIILNLHATLGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 320 aa Download sequence |
MGRAPCCEKV GLRRGRWTKE EDEKLARYIR ENGEGAWRSM PKNAGLLRCG KSCRLRWINY 60 LRADLKRGNI SPQEEDIILN LHATLGNRWS LIAGHLPGRT DNEIKNYWNS HLSRKGYEFL 120 RGGGGGGGAV VNVDLSKLPG GGKRRGGRTG RSSSGKEKTR TKEKDKAPAP EAAHNDDDGG 180 GGGGGGIDNV SAASHSHREE QAQASASGLT SDGLEEGPLG LSEEMVSGPV GPVSPKPEVG 240 QDGSSAESGC CGPSGPSGPT EAVGQDMGDK SMDWDLVGLD DGFANDDMWG SLSWDYGELV 300 GPDGVHQGEV LSDLFFLGNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 4e-70 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OGLUM01G14390.1 |