PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G08020.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 322aa MW: 34871.6 Da PI: 6.6592

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G08020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.6	4.1e-11	188	233	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ OGLUM01G08020.1 188 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVA 233 8999*********************************999987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MAQLPPKIPT MATAWPEFGG GHHHHAAHGH HHQRSPSMGA FLAAPLPPFP LPPPAPANGG 60 AQQQQQQHQP SWVDEFLDFS AAKRGAHRRS VSDSVAFLDP VSDDNAGVGA HDFDRLDDDQ 120 LMSMFSDDLQ PPPPQQQPAA PAASASSPSD HNSMNDEKQD KGETDEAQSE CDGATPGQPA 180 SPATVDPKRV KRILANRQSA QRSRVRKLQY ISELERSVTS LQTEVSALSP RVAFLDHQRS 240 LLTLGNSHLK QRIAALAQDK IFKDAHQEAL KKEIERLRQI YHQQSLKNAE SQPADAAPVR 300 GRDNADLIGS EGAAAAAPCP HS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	2e-95	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G08020.1