PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM01G05200.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 347aa MW: 36681.7 Da PI: 9.99

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM01G05200.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.4	5.6e-12	250	310	2	62
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ke r +r+ +NR++A+ R+RKka++ eLe k+k Le N +L +++++l++e +l++ OGLUM01G05200.1 250 KEQNRLKRLLRNRVSAQQARERKKAYMTELEAKAKDLELRNAELEQRVSTLQNENNTLRQI 310 78899***************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MVPSHATLPA SPPSDGSGVD GPDDGHVALQ NLPPTPPTSP THFPHLSLSS HPATEHTDSF 60 SLSSALSISL SSHPICICFS FPHLCFVFVV VSCFFLLLLL DLILFFFPSL FSAARGEVEC 120 GVVRWLVGEI LIWSSLEMAA QEQEQEKQQA KTSTTSSLPS SSERSSSSAP NNLKEGGGAT 180 RRYGGCRRWA GAAGRRRRGX XXXXAGADER QGNEEGKQQG GGGGGGGAAA GGGQEQAPPA 240 RKRGRSAGDK EQNRLKRLLR NRVSAQQARE RKKAYMTELE AKAKDLELRN AELEQRVSTL 300 QNENNTLRQI LKNTTAHAGK RGGGGGGGGG KGGDGGGGGK KHHFTKS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MVPSHATLPA SPPSDGSGVD GPDDGHVALQ NLPPTPPTSP THFPHLSLSS HPATEHTDSF  60
SLSSALSISL SSHPICICFS FPHLCFVFVV VSCFFLLLLL DLILFFFPSL FSAARGEVEC  120
GVVRWLVGEI LIWSSLEMAA QEQEQEKQQA KTSTTSSLPS SSERSSSSAP NNLKEGGGAT  180
RRYGGCRRWA GAAGRRRRGX XXXXAGADER QGNEEGKQQG GGGGGGGAAA GGGQEQAPPA  240
RKRGRSAGDK EQNRLKRLLR NRVSAQQARE RKKAYMTELE AKAKDLELRN AELEQRVSTL  300
QNENNTLRQI LKNTTAHAGK RGGGGGGGGG KGGDGGGGGK KHHFTKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	321	331	RGGGGGGGGGK
2	327	337	GGGGKGGDGGG
3	328	338	GGGGKGGDGGG
4	329	339	GGGGKGGDGGG
5	331	341	RGGGGGGGGGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11260.1	1e-30	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM01G05200.1