PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu063414.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 285aa MW: 32425.6 Da PI: 9.2786 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.2 | 3.3e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l d++k +G g+W+t +++ g++R++k+c++rw++yl Oeu063414.1 14 RGAWTAAEDKILRDYIKFHGEGRWRTLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.5 | 9.7e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T +E+e +++++k+lG++ W++Ia +++ gRt++++k++w++ Oeu063414.1 67 RGNITWDEEEVIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MGRNPCCTKV GLNRGAWTAA EDKILRDYIK FHGEGRWRTL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI TWDEEEVIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLRRRVHQND 120 PKSASICDNL LENPNSKGKM KIGLKNESPP VVRTKATRCS KSFIDQQDIQ NEFNKKTDNS 180 SSLVVKDSAD FSRTQPGSHN EFKQNLSSFR PDACFDDDLL NLSNVLNSEL WGVQELSDGN 240 KKVNNGLLSP SSGGPFYDEM LEDWIDPHIL TQIPDFGGDW LANV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 7e-63 | MYB family protein |