PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu062722.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 304aa MW: 34078.2 Da PI: 4.4954 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47 | 6e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l + + G +W+++++ g+ R++k+c++rw +yl Oeu062722.1 14 KGPWTAEEDKKLMNFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50.9 | 3.5e-16 | 71 | 111 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ E++ +d++ qlG++ W++Ia++++ gRt++++k++w+++ Oeu062722.1 71 SEYEEKTVIDLHSQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111 6779**************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MGRQPCCDKV GLKKGPWTAE EDKKLMNFIL TNGQCCWRAV PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SEYEEKTVID LHSQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLRKMG 120 IDPLTHQPLP TNTTENEPPK PQAAQPEVAV QNKEEEEEEV VVVDNDTPLQ STITDQAKDR 180 DKNIPTSPFD SMDVNNDFCI DEIPVIEPHE ILIPCENSSP SSSSSSAAAS SSSGGGGFSS 240 TLLEDLDFPT TFDYNEIMNS ISDDDLISSL DLYNNCDSNS NLMVEPLFPL MVSDEEFWKF 300 DFL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66230.1 | 3e-94 | MYB family protein |