PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu062525.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | TCP | ||||||||
Protein Properties | Length: 262aa MW: 27518.9 Da PI: 9.9147 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 123.9 | 1.7e-38 | 20 | 106 | 2 | 88 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+ +i+++tg+++++as+ a+ s s++ +s++ Oeu062525.1 20 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAESSIIAATGSGTIPASALAAAGVSISQQGNSIS 106 789******************************************************************888555555555555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MKDFQIVVAE KEEGKKQALA PKRSSNKDRH TKVEGRGRRI RMPALCAARI FQLTRELGHK 60 SDGETIQWLL QQAESSIIAA TGSGTIPASA LAAAGVSISQ QGNSISAGIH QKIDEFGGHM 120 GGPGGGGNRT SWPMVNLGRP HMASAGIWPP AVSGFGFQSS SGPPTVNLGS EGSNYLQKIG 180 FPGFDLSSSN IGPMSFTSIM GASTNQQLPG LELGLSQDGH IGVLNPQAMS QLYQQMGQSR 240 MHPQQQQQQA SPKDDSQGSG Q* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27010.1 | 2e-70 | TCP family protein |