PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu062152.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 574aa MW: 63382.4 Da PI: 7.0732

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu062152.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.5e-05	210	229	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+dCgk+F++ L H+r Oeu062152.2 210 TCKDCGKVFPSLRALSGHMR 229 6******************8 PP
2	zf-C2H2	13.2	0.00028	243	263	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk F + L H+++H Oeu062152.2 243 CKECGKGFDSMRALFGHMKSH 263 ********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MQGFLSSTIS PKAKATIRIQ DFRERERERK SPCVCVCVCV RERERIQYVS CFIGAYITAK 60 QSFSSSFRYF IFFGQMKSLM ETRPLLMGAM EAVQEQRHVC KICGKGCWSG KSLGGHMRVH 120 SALISAMKKE AAEVKFDYQM VSDGRDDQEG RFQYSNNQSN STYLDQEKIK NCGSNMGDDD 180 PKASYELREN PKKSCRNFDA KHGDTTRNGT CKDCGKVFPS LRALSGHMRC HSIKKSSSNQ 240 NHCKECGKGF DSMRALFGHM KSHSNKSRRV PDESAESSSD LDNLCDLRKK RSRIICKIDP 300 SPSSSVVDFG EVEEVALCLI MLSRGVKNWD RSKSGTESSG FDSAFFGDES VCKDKGIDVN 360 GGEDPSFDGN KVWKMGKLVG KFDSRILGSG NACSDKHVPC SDDLNSGFSS GNEMKVNSEI 420 SDGLLKSSCC DKALVGGHDS EFGKYLSENA HSDPKMLIDF DEKFDLKMVG SSSSVEVDIC 480 SLSVAEANSK IECNGIASFE CSICLRVFSS GQALGGHKRV HYGGLTENKT NKPVAMDGDF 540 DLNVPISIAE GEKEGVGVDQ WWYETRQEPM IDD*

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MQGFLSSTIS PKAKATIRIQ DFRERERERK SPCVCVCVCV RERERIQYVS CFIGAYITAK  60
QSFSSSFRYF IFFGQMKSLM ETRPLLMGAM EAVQEQRHVC KICGKGCWSG KSLGGHMRVH  120
SALISAMKKE AAEVKFDYQM VSDGRDDQEG RFQYSNNQSN STYLDQEKIK NCGSNMGDDD  180
PKASYELREN PKKSCRNFDA KHGDTTRNGT CKDCGKVFPS LRALSGHMRC HSIKKSSSNQ  240
NHCKECGKGF DSMRALFGHM KSHSNKSRRV PDESAESSSD LDNLCDLRKK RSRIICKIDP  300
SPSSSVVDFG EVEEVALCLI MLSRGVKNWD RSKSGTESSG FDSAFFGDES VCKDKGIDVN  360
GGEDPSFDGN KVWKMGKLVG KFDSRILGSG NACSDKHVPC SDDLNSGFSS GNEMKVNSEI  420
SDGLLKSSCC DKALVGGHDS EFGKYLSENA HSDPKMLIDF DEKFDLKMVG SSSSVEVDIC  480
SLSVAEANSK IECNGIASFE CSICLRVFSS GQALGGHKRV HYGGLTENKT NKPVAMDGDF  540
DLNVPISIAE GEKEGVGVDQ WWYETRQEPM IDD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	7e-23	C2H2 family protein