PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu062110.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 303aa    MW: 34059.3 Da    PI: 8.1274
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu062110.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.14.8e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +vk++G+g+W++++   g++R+ k+c++rw +yl
      Oeu062110.1 14 KGPWTPEEDIKLVSYVKEHGPGNWRAVPTNAGLRRCSKSCRLRWANYL 61
                     79********************************************97 PP
2Myb_DNA-binding49.41.1e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T  E+++++++ ++lG++ W++Ia++++  Rt++++k++w+++l
      Oeu062110.1  67 RGNFTVHEEKIIIQLQALLGNK-WASIASYLP-ERTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGRPPCYDKV GVKKGPWTPE EDIKLVSYVK EHGPGNWRAV PTNAGLRRCS KSCRLRWANY  60
LRPGIKRGNF TVHEEKIIIQ LQALLGNKWA SIASYLPERT DNDIKNYWNT HLKKKVKNLP  120
SSNFEAHSIT RGQWEMKLQT DINMAKQALH DALSYQNTSN FTELIPEFKP PDTKSGKEFT  180
YASSTENIAR LLKQWAINRP KSSITQNSVD CSARESIPSP CTERKSGNTL SESLFWFGSA  240
SFDSSNSEIE FSGTGSPEAG FLHGESKLDP TALGPTHLST LENLLLDDQW KECVFDESLD  300
LF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.12e-96MYB family protein