PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu061653.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 673aa MW: 75113.4 Da PI: 5.9255

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu061653.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	2.9e-05	102	123	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C++ F ++ n++rHir+H Oeu061653.1 102 KCKKCSREFCSPVNYRRHIRVH 123 7*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MSVAKLSTSG ALNAMKKEEG NDSLDTFSRQ AIQKEPLLSF SRTGDSPVQW IQFLNALDQP 60 ECFWTFISEM PMAVGAFDMH VAKANDLPGW PLLTSLKVTI KKCKKCSREF CSPVNYRRHI 120 RVHLRSLNVN KESHKNRDLL AAFWDKLSVE EAKEVLSLKD ASLKEIPSSS VIRALASSLH 180 QPGVWTLPQV YVRAGSTLLD IIQANSSRLP ISSQELFSIL DDASENTFLC AGTAESLQKY 240 VFDEETARHS LKLTNLIACT TFLFEQQLVK AWIDDKDAEA LRCQKLLVEE EEAAQKRQDE 300 QLERKKQKKL RRKEQKTKDQ LNACKEYLNI SNNALDEFLS AEVPDPTSSS DSNLSSPDMP 360 VIVSSWPKSI QFTSEAIDVS EAMFDFSSEH IDADNFQTVE TQKMDSDGRW HLATNRCQVT 420 KSQKGDRNGF YVSHDLEGLK SETIQKLTPK DHGTLLNGSK AWTKKFKVDN DDQNSKPRLQ 480 EETSNQTDKN SFKVMIGSIS VTLSNPDEVQ YTCSTKRAIP KKSDVLEKIG KHSAGKPLIP 540 VNRHETSGIC PVDKGDEESE GSVLDKAGDQ TVCVERCMQS CSIDSDDRDG GKHSNIFSDG 600 NTKQRGLSFC SVAAKEFLSQ RRKEVMSSNH VKLVLFSEIE PPLFSGAEDD NFTKAAQTLD 660 FHEGTVNGNA ET*

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MSVAKLSTSG ALNAMKKEEG NDSLDTFSRQ AIQKEPLLSF SRTGDSPVQW IQFLNALDQP  60
ECFWTFISEM PMAVGAFDMH VAKANDLPGW PLLTSLKVTI KKCKKCSREF CSPVNYRRHI  120
RVHLRSLNVN KESHKNRDLL AAFWDKLSVE EAKEVLSLKD ASLKEIPSSS VIRALASSLH  180
QPGVWTLPQV YVRAGSTLLD IIQANSSRLP ISSQELFSIL DDASENTFLC AGTAESLQKY  240
VFDEETARHS LKLTNLIACT TFLFEQQLVK AWIDDKDAEA LRCQKLLVEE EEAAQKRQDE  300
QLERKKQKKL RRKEQKTKDQ LNACKEYLNI SNNALDEFLS AEVPDPTSSS DSNLSSPDMP  360
VIVSSWPKSI QFTSEAIDVS EAMFDFSSEH IDADNFQTVE TQKMDSDGRW HLATNRCQVT  420
KSQKGDRNGF YVSHDLEGLK SETIQKLTPK DHGTLLNGSK AWTKKFKVDN DDQNSKPRLQ  480
EETSNQTDKN SFKVMIGSIS VTLSNPDEVQ YTCSTKRAIP KKSDVLEKIG KHSAGKPLIP  540
VNRHETSGIC PVDKGDEESE GSVLDKAGDQ TVCVERCMQS CSIDSDDRDG GKHSNIFSDG  600
NTKQRGLSFC SVAAKEFLSQ RRKEVMSSNH VKLVLFSEIE PPLFSGAEDD NFTKAAQTLD  660
FHEGTVNGNA ET*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	303	310	ERKKQKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-101	C2H2 family protein