PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu061644.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 224aa MW: 25689.2 Da PI: 9.8883 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.7 | 4.6e-17 | 27 | 74 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lvd +++ G gtW+ +++ g+ R++k+c++rw +yl Oeu061644.1 27 KGAWTPQEDKILVDFITKNGHGTWRDLPKHTGLLRCGKSCRLRWANYL 74 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 38.1 | 3.6e-12 | 80 | 125 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ ++eE+ ++++ +lG++ W++Ia++++ gR ++++k+ w+++l Oeu061644.1 80 RGPLSPEEENTIIHLQGMLGNK-WAAIASHLP-GRKDNDIKNLWHSHL 125 7999******************.*********.***********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MGNKREKEEG EKKKWRKPCC EKERVRKGAW TPQEDKILVD FITKNGHGTW RDLPKHTGLL 60 RCGKSCRLRW ANYLRPDIKR GPLSPEEENT IIHLQGMLGN KWAAIASHLP GRKDNDIKNL 120 WHSHLKKHFS SKCSHPPASS EMVMKLDSPS EWENVRVEAK SSFSANALLL NNQSSVYKSD 180 QGDYFIRLRN SELGKSFQNI KENVEPINCK TRAEDMTTAY SDL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 11 | 18 | EKKKWRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 6e-67 | MYB family protein |