PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu059148.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 258aa    MW: 29415.8 Da    PI: 4.983
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu059148.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.53.2e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd++l+ +++q+G g+W++ ++  g+ R++k+c++rw +yl
      Oeu059148.1 14 KGPWSPEEDLILISYIQQHGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding53.94.2e-1767112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE+e+++++++++G++ W++Ia++++ gRt++++k+ w+++l
      Oeu059148.1  67 RGNFSKEEEEIIIKLHEMMGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MVRAPCCEKM GLKKGPWSPE EDLILISYIQ QHGHGNWRAL PKQAGLLRCG KSCRLRWTNY  60
LRPDIKRGNF SKEEEEIIIK LHEMMGNRWS AIAARLPGRT DNEIKNVWHT HLKKKLKNNK  120
TFEDSNGHSI IQECDSKAPE NPNSPSEQIV DSPQHCSSEM SSVTDLSEKT VSKHEEMDYS  180
SEYFPHIDET FWSDELSTDD NTNVQSSNFP AAKDEVQFGF PSSSEEIDAG ISKVDDSMDF  240
WYNVFIRAGD MPDLPEF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.13e-72MYB family protein