PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu058501.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 412aa MW: 46074.6 Da PI: 8.5291

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu058501.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.3	1.7e-17	122	171	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Oeu058501.1 122 SQYRGVTFYRRTGRWESHIWD------CgKQIYLGGFDTALAAARAYDKAAIKFRG 171 78*****************......55**********************997 PP
2	AP2	40.4	7.5e-13	214	263	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 s+y+GV+ +k grW+A+ + g +k+++lg f+++ eAa+a+++a+ + + Oeu058501.1 214 SRYRGVTLHK-CGRWEARMGQF--HG-KKYIYLGLFDSEVEAARAYDKAAIQCN 263 79******.7**6663..33.6******99*******98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MFDLNLSIDL NGKVNFEEDE SPVTSTSSVV NGEGSSTCSP ETSYTFNFAI LDRNSPVVKD 60 RGLTVPEPVT RELFPMSEIG ELNMGKANNN VDQRRKLVQQ QKLQVQHVQP KKSRRGPPSK 120 SSQYRGVTFY RRTGRWESHI WDCGKQIYLG GFDTALAAAR AYDKAAIKFR GVDADINFNL 180 GDYEEEINQM KNLSKEELVQ ILRRHSTGFS RGSSRYRGVT LHKCGRWEAR MGQFHGKKYI 240 YLGLFDSEVE AARAYDKAAI QCNGRDAFTN FESSKYDRES MLEGSQNDLD LNLGISTSSP 300 KENECLALPQ FQPYDVQNAR KSKMDSPLKG LPLTTSRAGL NPNLVSFCEE RVAEKRVEVS 360 QGLPYWGWRV DSQAIPMAIF SPAASSGFSS PATTSLSTDK SLYHLQTRPP P*

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MFDLNLSIDL NGKVNFEEDE SPVTSTSSVV NGEGSSTCSP ETSYTFNFAI LDRNSPVVKD  60
RGLTVPEPVT RELFPMSEIG ELNMGKANNN VDQRRKLVQQ QKLQVQHVQP KKSRRGPPSK  120
SSQYRGVTFY RRTGRWESHI WDCGKQIYLG GFDTALAAAR AYDKAAIKFR GVDADINFNL  180
GDYEEEINQM KNLSKEELVQ ILRRHSTGFS RGSSRYRGVT LHKCGRWEAR MGQFHGKKYI  240
YLGLFDSEVE AARAYDKAAI QCNGRDAFTN FESSKYDRES MLEGSQNDLD LNLGISTSSP  300
KENECLALPQ FQPYDVQNAR KSKMDSPLKG LPLTTSRAGL NPNLVSFCEE RVAEKRVEVS  360
QGLPYWGWRV DSQAIPMAIF SPAASSGFSS PATTSLSTDK SLYHLQTRPP P*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-105	AP2 family protein