PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu058418.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family TCP
Protein Properties Length: 337aa    MW: 38723.5 Da    PI: 8.467
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu058418.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP131.96.2e-411222432133
          TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskk 99 
                  + k+drhski+T++g RdRR+Rls+++a++fFdLqd LG+dk+sktieWL++++k+aik+l +++ + ++++       s++    +k+  s++++k+
  Oeu058418.1 122 TRKTDRHSKICTAQGIRDRRMRLSLPVARKFFDLQDLLGYDKASKTIEWLFTKSKKAIKDLEKDCPQVKNSS-------SSD----AKRLLSNPHEKD 208
                  5799************************************************************44444222.......222....233333345555 PP

          TCP 100 sqksaasalnlak.esrakarararertrekmrik 133
                  +++  +  +n+   esr+karararertre+  ik
  Oeu058418.1 209 DRELRKPLSNYCTrESREKARARARERTRENLLIK 243
                  55555555666656****************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MFPSTNRNNP FESLFKGSFT YDEQNPSSSQ DLDPPFLLHF PSPSLVDYEF PLNQIFSRHQ  60
IINGREVLPN HNQIFMDTTN WGPIINTELP KLNKEKEAGL TREPETATEG KRNLGAVPRK  120
RTRKTDRHSK ICTAQGIRDR RMRLSLPVAR KFFDLQDLLG YDKASKTIEW LFTKSKKAIK  180
DLEKDCPQVK NSSSSDAKRL LSNPHEKDDR ELRKPLSNYC TRESREKARA RARERTRENL  240
LIKFLQDSNT WYAENPKSFE QLGCSRRDPF EAIEEMTLKH VDFYPLDHQL ANVGITGNFL  300
GPENSLSCPI SNYNEGYDVF SCCVDSSNNH IGFLGN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.12e-28TCP family protein