PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu058248.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 283aa MW: 32656.1 Da PI: 8.8162

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu058248.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.7	4.8e-06	122	141	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C+k+F+r n++ H+ Oeu058248.1 122 FSCNICNKTFNRYNNMQMHM 141 89*****************9 PP
2	zf-C2H2	12.1	0.00058	206	228	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +C ksF k + ++H +++ Oeu058248.1 206 FMCRKCAKSFAVKGDWRTHEKNC 228 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MSFLKYPLYY QEQPPKEEYN IYETIKCLPL LSRFKEEKTV KYEEEDEDGD GAKKEEKMEK 60 VTVSLHIGLP NMGANFDTET KPYSFKEKNE KKSSTACGFN SSDQRRFWIP TPAQILVGPM 120 QFSCNICNKT FNRYNNMQMH MWGHGSEYRK GPESLRGTQP AAMLRLPCYC CAQGCKNNIN 180 HPRAKPLKDF RTLQSHYKRK HGTKPFMCRK CAKSFAVKGD WRTHEKNCGK LWYCTCGSDF 240 KHKRSLKDHV RSFGKGHSPY PSLEGFEDEK ECVTGGSEDE NA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-113	C2H2 family protein