PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu055969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 224aa MW: 25711.2 Da PI: 7.7165 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.9 | 3.5e-16 | 12 | 59 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd++l+++v+ +G g+W++++++ g+ R +k+c++rw +yl Oeu055969.1 12 KGFWKPEEDLILKKYVETHGEGNWTAVSKKSGLQRGPKSCRLRWKNYL 59 688*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.6 | 1.8e-15 | 65 | 110 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++++E +l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l Oeu055969.1 65 RGMMSEDERDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 110 6789******************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 224 aa Download sequence |
MEGKEVMARL KKGFWKPEED LILKKYVETH GEGNWTAVSK KSGLQRGPKS CRLRWKNYLR 60 PNIKRGMMSE DERDLIIRMH KLLGNRWSLI AGRLPGRTDN EVKNYWNTHL NKRASRRPNM 120 NLDSESDKKH QLSSGLHIAE DGNLEKKTAG SSIEEEVNVV SEFSAENLKN IDYDINFPSI 180 FTNRAPFFYE DEIFMPILDD FVLFEAFGTN GGEITGEGFQ PLL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G52600.1 | 4e-63 | MYB family protein |