PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu055041.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | GRAS | ||||||||
Protein Properties | Length: 126aa MW: 14054.5 Da PI: 5.8799 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 87.2 | 2.7e-27 | 10 | 121 | 156 | 271 |
GRAS 156 eeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesF 253 +l +tg+rL++fA+ l++ fef++ v+ +++l+ +++r++p+Eal Vn++lql+ lldes l + + Lkl sl+Pkvv++ e+++n+ +F Oeu055041.1 10 VALLATGNRLRDFAKLLDLIFEFEP-VMIPVQELNGSSIRIDPDEALGVNFMLQLYGLLDESNGLVE---AALKLAESLNPKVVTMGVYEVSLNRVRF 103 57789********************.7999*********************************9999...**************************** PP GRAS 254 lerflealeyysalfdsl 271 l+rf + l+yy+a++ sl Oeu055041.1 104 LHRFKNVLKYYTAILLSL 121 **************9887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence |
MLSLRDSPSV ALLATGNRLR DFAKLLDLIF EFEPVMIPVQ ELNGSSIRID PDEALGVNFM 60 LQLYGLLDES NGLVEAALKL AESLNPKVVT MGVYEVSLNR VRFLHRFKNV LKYYTAILLS 120 LRNCP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66770.1 | 1e-47 | GRAS family protein |