PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu054894.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 303aa MW: 32066.8 Da PI: 10.1378

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu054894.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.7	1e-38	40	144	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 k+ +++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa+ ++tgt++++a+++ + s ++s+s+ s++ Oeu054894.1 40 SKRNSTKDRHTKVDGRGRRIRMPAICAARVFQLTKELGHKTDGETIEWLLQQAEPAVFAATGTGTIPANFSsLNLSVRNSGSTMSAPlhlrnnyfkqs 137 6999****************************************************************999666666666664444466655554433 PP TCP 89 ......k 89 + Oeu054894.1 138 lrssieD 144 3322220 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MRSPNFPFEL LQKRNPAEAS SSSTFPSDSG NLEAQKKPQS KRNSTKDRHT KVDGRGRRIR 60 MPAICAARVF QLTKELGHKT DGETIEWLLQ QAEPAVFAAT GTGTIPANFS SLNLSVRNSG 120 STMSAPLHLR NNYFKQSLRS SIEDSQKRVS FSEFGLSSSE NNPLNCPDGN ISVSSMIQAK 180 QEQAVQTHML QSSTGLIPAS HGQIPPQTFL MVTNPSSQVT SGDSLWSFPA TGNSSTTYRG 240 SSMPSGGIHF MNFPTPLALL PGQHLGMGNG GGSGSGGGGT VVDGHLSILA TLNGFRPGGS 300 ES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-49	TCP family protein