PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu054779.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 348aa MW: 38403.4 Da PI: 9.9411

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu054779.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.6e-19	14	59	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell ++v+++G+++W++I++ + gR++k+c++rw + Oeu054779.1 14 KGPWSPEEDELLQRLVEKHGPRNWSLISKSIA-GRSGKSCRLRWCNQ 59 79****************************.*********985 PP
2	Myb_DNA-binding	54.1	3.5e-17	68	110	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+eEd+ +++a++++G++ W+tI+r + gRt++ +k++w++ Oeu054779.1 68 AFTPEEDQTIIRAHAKFGNK-WATISRLLS-GRTDNAIKNHWNST 110 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MAVLSQRKEM DRIKGPWSPE EDELLQRLVE KHGPRNWSLI SKSIAGRSGK SCRLRWCNQL 60 SPEVQHRAFT PEEDQTIIRA HAKFGNKWAT ISRLLSGRTD NAIKNHWNST LKRKCFSMSE 120 EFNNFEPESL QPLKRSSSVG PSTKLCSSGL YLDPSSPSGS DLSDSSLSGH QIYRPTARTG 180 GTSPQHSSPS QPDLLTSLSL SLPGSSSSPK TVLETSMKSV SQQRKPVSDP TPKPLQEPAL 240 KSGYHIQKTQ SSTPLPPQPH VQLTFPPLAP VSMQTLQYAA AAKPTPSPSQ AVADKQFFSP 300 EFLATLQEMI RKEVRNYMEG IEPNGFYMHT DAIRNAVAKR IGISEID*

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MAVLSQRKEM DRIKGPWSPE EDELLQRLVE KHGPRNWSLI SKSIAGRSGK SCRLRWCNQL  60
SPEVQHRAFT PEEDQTIIRA HAKFGNKWAT ISRLLSGRTD NAIKNHWNST LKRKCFSMSE  120
EFNNFEPESL QPLKRSSSVG PSTKLCSSGL YLDPSSPSGS DLSDSSLSGH QIYRPTARTG  180
GTSPQHSSPS QPDLLTSLSL SLPGSSSSPK TVLETSMKSV SQQRKPVSDP TPKPLQEPAL  240
KSGYHIQKTQ SSTPLPPQPH VQLTFPPLAP VSMQTLQYAA AAKPTPSPSQ AVADKQFFSP  300
EFLATLQEMI RKEVRNYMEG IEPNGFYMHT DAIRNAVAKR IGISEID*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	2e-72	MYB family protein