PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu054678.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 163aa MW: 19076.4 Da PI: 6.5608 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.6 | 1.4e-20 | 63 | 117 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t+eq++ Le+ Fe ++++ e++++LAk lgL+ rqV vWFqNrRa++k+ Oeu054678.1 63 KKRRLTPEQVNLLEKSFEAENKLEPERKTQLAKYLGLQPRQVAVWFQNRRARWKN 117 5678*************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 132.2 | 2e-42 | 62 | 154 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqv+lLE+sFe+e+kLeperK++la+ LglqprqvavWFqnrRAR+k+kqlE+dy++Lk++y++l ++ +++ ke+e+L++e+k+ Oeu054678.1 62 EKKRRLTPEQVNLLEKSFEAENKLEPERKTQLAKYLGLQPRQVAVWFQNRRARWKNKQLERDYDQLKSSYESLLSNYDSILKENEKLKAEVKS 154 69***************************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MDFGRSFFNS SYSGNMFPGN GDSIFHGATS VMSMEETAKR RPFFSTPEEL YDEEYLDEQS 60 PEKKRRLTPE QVNLLEKSFE AENKLEPERK TQLAKYLGLQ PRQVAVWFQN RRARWKNKQL 120 ERDYDQLKSS YESLLSNYDS ILKENEKLKA EVKSHLANLT VF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 119 | RRARWKNKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 3e-64 | HD-ZIP family protein |