PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu053134.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 284aa    MW: 32251.7 Da    PI: 8.8857
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu053134.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.12.1e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEde+lv+++k++G g+W++ ++  g+ R++k+c++rw +yl
      Oeu053134.1 14 KGAWTKEEDERLVNYIKRHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding59.47.7e-1967111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T+eE+e++++++ +lG++ W++Ia++++ gRt++++k++w+++
      Oeu053134.1  67 RGNFTEEEEEIIINLHSLLGNK-WSLIAARLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGRSPCCEKE HTNKGAWTKE EDERLVNYIK RHGEGCWRSL PKAAGLLRCG KSCRLRWINY  60
LRPDLKRGNF TEEEEEIIIN LHSLLGNKWS LIAARLPGRT DNEIKNYWNT HIKRKLLHRG  120
VDPQTHRPLN STTKKPNPNT KVLISNQENN LRQVSEIAQT FSLHPINASE DQVMKNCISF  180
KVENDSAEEL NGSSVLSEEL HPQINLELTI SLPKSFGKSG IKLKQEKQQF EDQTFGTLMS  240
PPSVTQAGCL CYNLGFQNGN ACNCKSMKNV KTDDMQRYCR PLG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.14e-86MYB family protein