PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu052885.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 432aa MW: 49623.1 Da PI: 8.4561

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu052885.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.6e-05	136	155	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C++Cgk F+++ +L H+r Oeu052885.1 136 SCKICGKDFPSQKSLFGHMR 155 6******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MVDDQDIQSQ SIKNNDHKSQ VCGPLFGEEN MWIKLKISKN EEERTKEDQN YGFQEKDQMY 60 NNKRVCRFCD KVFSSGKALG GHTRIHFQAN KDLVFNKKLK AHKSVKYKKK RYLPEDEDRV 120 IDFVKKKFEG NNKKQSCKIC GKDFPSQKSL FGHMRCHPER DWRGIQPPAM ARNSSQSSSS 180 SDAEIQKIDD QVDLTKSLKG WSVTAKRGRR VTVASISEIS SLEDDQLWDA VNDLMMLAHG 240 GPFESTLINR QKVDDIIISK SKKQIVEELS SSNFENLEYL QVKSITEIGD SRTGHILEKP 300 IIEFEHNDCL DDKKMYLETN YGNVTIKNKK RRKRVKLSDL ELVRNGSSKL ALQPDKYRFN 360 TCDKSFTTHQ ELGGYRSTHK NIKIWVDEIS NPIVQLADEA KESEASNICW RVLDFDLNEV 420 PPSKDEAGIE S*

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MVDDQDIQSQ SIKNNDHKSQ VCGPLFGEEN MWIKLKISKN EEERTKEDQN YGFQEKDQMY  60
NNKRVCRFCD KVFSSGKALG GHTRIHFQAN KDLVFNKKLK AHKSVKYKKK RYLPEDEDRV  120
IDFVKKKFEG NNKKQSCKIC GKDFPSQKSL FGHMRCHPER DWRGIQPPAM ARNSSQSSSS  180
SDAEIQKIDD QVDLTKSLKG WSVTAKRGRR VTVASISEIS SLEDDQLWDA VNDLMMLAHG  240
GPFESTLINR QKVDDIIISK SKKQIVEELS SSNFENLEYL QVKSITEIGD SRTGHILEKP  300
IIEFEHNDCL DDKKMYLETN YGNVTIKNKK RRKRVKLSDL ELVRNGSSKL ALQPDKYRFN  360
TCDKSFTTHQ ELGGYRSTHK NIKIWVDEIS NPIVQLADEA KESEASNICW RVLDFDLNEV  420
PPSKDEAGIE S*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	329	333	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26940.1	3e-17	C2H2 family protein