PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu052556.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 351aa MW: 40027.8 Da PI: 5.8775

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu052556.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.4	1.1e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+++++++G +W++ ++ + R++k+c++rw +yl Oeu052556.1 14 KGPWTPEEDMKLIQYIQEHGACNWRSLPKNAWLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.9	8.4e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia+ ++ gRt++++k++w+++ Oeu052556.1 67 RGRFSFEEEETIIQLHSVLGNK-WSAIAAQLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MGRSPCCDKN GVKKGPWTPE EDMKLIQYIQ EHGACNWRSL PKNAWLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIAAQLPGRT DNEIKNYWNT HIRKRLLRNG 120 IDPVTHAPRL DLLDLSSLLH LPQINLTNLL RLHTLLNPEA LRLAASLQEN PELLLTKLQE 180 NQLFNAQLQN QTPIFQTDQF QNTFDPNTPL CNPSTDLPVT ASVSNQSHLI QENIEKISMN 240 SESLSGKTFQ NNPTTTFESV PFMENFYNGD SYQMQKDLSE NIRFQSSNSG SNNSHKFGFD 300 SILSTPLSSP NPLNSSSTYV NGNTEDERES YCSNLLKFEI PESLDFDDFM *

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MGRSPCCDKN GVKKGPWTPE EDMKLIQYIQ EHGACNWRSL PKNAWLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIAAQLPGRT DNEIKNYWNT HIRKRLLRNG  120
IDPVTHAPRL DLLDLSSLLH LPQINLTNLL RLHTLLNPEA LRLAASLQEN PELLLTKLQE  180
NQLFNAQLQN QTPIFQTDQF QNTFDPNTPL CNPSTDLPVT ASVSNQSHLI QENIEKISMN  240
SESLSGKTFQ NNPTTTFESV PFMENFYNGD SYQMQKDLSE NIRFQSSNSG SNNSHKFGFD  300
SILSTPLSSP NPLNSSSTYV NGNTEDERES YCSNLLKFEI PESLDFDDFM *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28110.1	2e-84	MYB family protein