PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu052555.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 351aa MW: 39484.1 Da PI: 6.3981

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu052555.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++++++G +W+t ++ g+ R++k+c++rw +yl Oeu052555.1 14 KGPWTSEEDTKLIQYIQEHGACNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.7	4.7e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ Oeu052555.1 67 RGRFSFEEEETIIQLHSVLGNK-WSAIAARLP-GRTDNEVKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MGRSPCCEKN GVKKGPWTSE EDTKLIQYIQ EHGACNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIAARLPGRT DNEVKNYWNT HIRKRLLRNG 120 IDPVTHAPRL DFLDISSLLN LPQINLSNLL RLQTLLNPEA LRLATSLQEN PELLLTKLQE 180 NQLFNAQLQN QNPVFQTDQF RNTFDPHSPL CNPSTYLPAT ASVSNQSHLV QGNMGQFSLN 240 SESSSGQTFQ NNPTTTFESV PFIENFLFGA SDQMQKDLSE NISFQSLNGG SNSSKNFSFD 300 SVLSTPLSSP THLNSSSAYI NGNAEDGRES NCSNLFKFEI PESLDFDDFM *

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MGRSPCCEKN GVKKGPWTSE EDTKLIQYIQ EHGACNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIAARLPGRT DNEVKNYWNT HIRKRLLRNG  120
IDPVTHAPRL DFLDISSLLN LPQINLSNLL RLQTLLNPEA LRLATSLQEN PELLLTKLQE  180
NQLFNAQLQN QNPVFQTDQF RNTFDPHSPL CNPSTYLPAT ASVSNQSHLV QGNMGQFSLN  240
SESSSGQTFQ NNPTTTFESV PFIENFLFGA SDQMQKDLSE NISFQSLNGG SNSSKNFSFD  300
SVLSTPLSSP THLNSSSAYI NGNAEDGRES NCSNLFKFEI PESLDFDDFM *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28110.1	2e-86	MYB family protein