PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu051317.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 298aa    MW: 32638.5 Da    PI: 8.7329
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu051317.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.35.3e-33157213158
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  d p+YVNaKQy++Il+RRq+Rakle+++kl +k+rkpylheSRh hAl+R RgsgGrF
  Oeu051317.2 157 DGPIYVNAKQYHGILRRRQTRAKLEAQNKL-IKNRKPYLHESRHLHALNRVRGSGGRF 213
                  57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MPQDLATSLS MANLHKKFSE SSPKNLNSKV EYPSQHLSFQ LQDQHSSSTQ STGSYHEVTA  60
MGKTSSQDQC ASADSDVLDQ SCGKCVQEVI PTLLLGNPDS FISPSQAEIS QPMVPYAYSD  120
PYLSRLYTSY GPHAMFQPQV MGSASIRVPL PVDISEDGPI YVNAKQYHGI LRRRQTRAKL  180
EAQNKLIKNR KPYLHESRHL HALNRVRGSG GRFLSSKKPQ QPNSTHSSSS LGMVDSLHVE  240
ADTNETPIEA TRVGNGDVVF SQSNSMFSSV QSNVVVPMQG SSGLVYHGNR HYASIVR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.11e-41NF-YA family protein