PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050528.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 617aa    MW: 67692.5 Da    PI: 5.1503
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050528.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS350.23.3e-1072476153373
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  ++Ll+cA  +s++d e+a +lL +l+   s++g+p++R+ +yf eAL  r++++ +++    +  +t   +s+e + ++k++++++P+ kf+++taNq
  Oeu050528.1 247 KALLDCAC-LSESDPENAGKLLIQLKGSISQHGNPIERVSFYFSEALYYRISNQAEKIP---TIYDT---TSEEYILSYKALNDACPYSKFAQFTANQ 337
                  7899**95.8889****************************************333333...33344...4889************************ PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                  aIlea+eg++++Hi+Df+i qG+QW+aLlqaLa+R++g+p ++Ri g+ + + g   + +l +t++rL +fA+ l+++fef++ v+  +++l+ +++r
  Oeu050528.1 338 AILEATEGAKKIHIVDFGIIQGVQWAALLQALATRSAGKPeRIRISGIPALSLGdsPAATLLATRNRLLDFAKLLDLNFEFEP-VMIPVQELNGSSIR 434
                  ************************************76666*********9988889999***********************.7999********** PP

         GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak..lp.reseerikvErell 290
                  ++p+E+laVn++lql+ lldes  l +     Lkl ksl+Pkvv++ e e+++n+  Fl+rf +al+yy+a+f+sle +  +   +s er  +Er +l
  Oeu050528.1 435 IDPDEVLAVNFMLQLYGLLDESNGLVE---VALKLAKSLNPKVVTLGEYEVSLNRVGFLHRFKNALKYYTAVFESLEPEpnMTmMDSAERLQIERLIL 529
                  ***********************9999...9*********************************************66522431456*********** PP

         GRAS 291 greivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaW 373
                  gr+i  +v  e+ + rrer+e +e+Wr  +e+aGF+p++ls++a++qa lllr+++ s  y++ ++s  ++ l W+d pL+++S+W
  Oeu050528.1 530 GRRIAGIVGPEEPRgRRERMEDKENWRLLMESAGFEPLKLSHYAMSQATLLLRNYNySTMYKLVDSSPGFLcLAWNDVPLLTISSW 615
                  *********999888*****************************************9999**9977655444************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 617 aa     Download sequence    
MAYMCTDSGN LMAIAQQVIQ QKQQQEQQQQ HHQQHQLLTI NPFCLGTWPT TTTTGAAHHH  60
QSPTATTSMS YGLIGTAAFT DPFQLPGAGP EAIEPGFHFP TLEHHSSGYR FSDLCGGPGG  120
EFDSDEWMES LMGGGDSTGS STIQSNCEAW QTSSEFNLYS ADAFTTCPPS RLSINSSSPS  180
NVNRAILSEP PQITAWVSTS PSTPPPSLPP VAVSRPAPKN QASVAGTTTR ASTSSEDTSF  240
STKPILKALL DCACLSESDP ENAGKLLIQL KGSISQHGNP IERVSFYFSE ALYYRISNQA  300
EKIPTIYDTT SEEYILSYKA LNDACPYSKF AQFTANQAIL EATEGAKKIH IVDFGIIQGV  360
QWAALLQALA TRSAGKPERI RISGIPALSL GDSPAATLLA TRNRLLDFAK LLDLNFEFEP  420
VMIPVQELNG SSIRIDPDEV LAVNFMLQLY GLLDESNGLV EVALKLAKSL NPKVVTLGEY  480
EVSLNRVGFL HRFKNALKYY TAVFESLEPE PNMTMMDSAE RLQIERLILG RRIAGIVGPE  540
EPRGRRERME DKENWRLLME SAGFEPLKLS HYAMSQATLL LRNYNYSTMY KLVDSSPGFL  600
CLAWNDVPLL TISSWH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein