PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050118.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 574aa    MW: 65959.3 Da    PI: 7.4233
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050118.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.94e-07421462240
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 
                      ++W +eE e l ++ +++++g   +W+ I++++g+gR+ +++
      Oeu050118.1 421 KPWGKEEIEMLRKGMQKYPKGtsrRWEVISEYIGTGRSVEEI 462
                      69***********************************99876 PP
2Myb_DNA-binding28.14.7e-09517560445
                      S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 
                      W+   ++ lv+a k ++++   +W+++a+ ++ g+t +qck ++ 
      Oeu050118.1 517 WSDVQEKALVQALKTFPKEtnqRWERVAAAVP-GKTVNQCKKKFA 560
                      ********************************.********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    
MLMATRKSMQ LITFSQEIVD GEPIYVSSNS LPIKAFKREP AGHAFHAAAL RLIGHVEETN  60
ADNQVEEGSN AKDQEYKQTS DFYSSKGKKK SGGEGKQQDH YALLGLGHLR YLATDEQIRK  120
SYRETALRHH PDKQAALLLS VETEAAKQAK KDEIENHFKA IQEAYEVLID PVKRRIYDST  180
DEFDDEIPYE CAPQDFFKVF GPAFLRNGRW SVHQPIPTLG DENSTLKEVD GFYDFWYSFK  240
SWREFPHADE FDLEEAESRD HKRWMERQNA KLSEKARKEE YARIPRIVEE EKRRKEEDER  300
KAAEAALNQK KLKEKEKKLL RKERTRLRTL SGAILSQHLL DLSDDNVEGL CMSLDIEQLR  360
NLCDKMETEE GLGRAEFLRE ALGSDNQLKD EKHNEKKNLQ QNGSMGVNEQ GLFGGNEKRE  420
KPWGKEEIEM LRKGMQKYPK GTSRRWEVIS EYIGTGRSVE EILKATKTVL LQKPDSSKAF  480
DSFLEKRKPT QSIASPLTAR EDLPGLSNSN ASDQDIWSDV QEKALVQALK TFPKETNQRW  540
ERVAAAVPGK TVNQCKKKFA LLKENFRNKK NAV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1292315KRRKEEDERKAAEAALNQKKLKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.11e-114MYB family protein