PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu049277.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 306aa    MW: 34233.2 Da    PI: 9.3419
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu049277.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding254.3e-082468345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+ E + + +a +++ ++   +W ++a++++ g+t+ +++  + 
      Oeu049277.1 24 KWTPAENKAFENALALYDKDtpdRWQKVAKMVP-GKTEWDVIRQYK 68
                     8********************************.***988887775 PP
2Myb_DNA-binding45.81.4e-14132176347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
      Oeu049277.1 132 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 176
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEILSPSSYF SNSNWLLEES GSTKWTPAEN KAFENALALY DKDTPDRWQK VAKMVPGKTE  60
WDVIRQYKVL EDDVSNIEAG LIPIPGYSMS SPFTLEWGSG HGFDGFDHAY VSEGKRSSSI  120
RPNEHERKKG VPWTEEEHKL FLMGLKKYGK GDWRNISRNF VITRTPTQVA SHAQKYFIRQ  180
LSGGKDKRRA SIHDITTVNL NENQNPSPEN KNPPSPEPSA VLPRQSNSAP VQKHTFHWNR  240
SPNDAVGGFQ PGGGLGNMFS PPYAVNSYGN KMQGQLIQRG GIHESLLGSQ NMAFQMQSGH  300
YFPHA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-102MYB_related family protein