PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu048869.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 559aa    MW: 63911.9 Da    PI: 5.1392
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu048869.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS266.49.3e-821885563374
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalkl....fsevsPilkfsh 95 
                   lLl + e v  +++  a+++++r   +as +g+p+qR+a yf+ A+++r++r++ +++      +++++n +++++  +++     ++  P+ ++ +
  Oeu048869.1 188 YLLLIAIENVGCQHFDFASKMITRCLLMASDSGTPIQRIAYYFAIAIRERMHRETGRIMTEK---TKQPMNpVKSHALETNItflaSHKELPFTQVMQ 282
                  67888889999999***************************************555555444...44444432222222222322245568******* PP

         GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                  ++  q I e v +++++H iD++i  G+QW aL+q L+++  ++  +l+iT+vg    ++++ +e tg+rL +fAe+l++pf+f++++++++ +++ +
  Oeu048869.1 283 FAVIQSIIENVRTDSKIHLIDLQIRSGIQWTALMQGLSEQHkHPIKHLKITAVGT---TDQHYIEGTGQRLLSFAESLNLPFSFKAVYVTDMRNFKED 377
                  **************************************98835556*********...6899************************************ PP

         GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
                   L+v+ gE+++V + l+l +++++  ++e+    v++++++l+P ++vv+e ea+hns+sF++rf+eal +ysa fd+le  + r s+ r+++E  ++
  Oeu048869.1 378 LLNVEAGETVVVYSFLMLRSMVSRLDCIEN----VMEAIRKLRPVLMVVIEVEANHNSPSFVDRFVEALLFYSAYFDCLEDCFERSSQYRMTLEGIYF 471
                  *********************966666666....**************************************************************** PP

         GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++ i n va+eg+er+ r+ +   Wr+ +e++ + +++lse+   qa+l+l+++  +   ++e++ + ++ gWk+ p+ s+++W+
  Oeu048869.1 472 NQGILNTVATEGQERTTRNVKIDVWRAFFERFRMIEIELSESSWYQANLVLSRFVyGSSCTLEHNGKGMIVGWKGTPIHSLTSWK 556
                  *****************************************************9988989************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    
MAKSFSDTPD DCDPLIGFEK EAAVTKSQQD PLFDMEDCEF MDLFSSIYGS CQENTMEEKS  60
ELFQNQQPDN CKQNDHMIMP FEVQSQVSEL GKSLKDKALS FSSAAVELES HYERGLKKTN  120
EETFNNLRSE NNVVGQKLTM EEILRVAGER FIQFSINKED GISTFIHPYG SSLLGLSIDE  180
ARDVELVYLL LIAIENVGCQ HFDFASKMIT RCLLMASDSG TPIQRIAYYF AIAIRERMHR  240
ETGRIMTEKT KQPMNPVKSH ALETNITFLA SHKELPFTQV MQFAVIQSII ENVRTDSKIH  300
LIDLQIRSGI QWTALMQGLS EQHKHPIKHL KITAVGTTDQ HYIEGTGQRL LSFAESLNLP  360
FSFKAVYVTD MRNFKEDLLN VEAGETVVVY SFLMLRSMVS RLDCIENVME AIRKLRPVLM  420
VVIEVEANHN SPSFVDRFVE ALLFYSAYFD CLEDCFERSS QYRMTLEGIY FNQGILNTVA  480
TEGQERTTRN VKIDVWRAFF ERFRMIEIEL SESSWYQANL VLSRFVYGSS CTLEHNGKGM  540
IVGWKGTPIH SLTSWKFA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.12e-58GRAS family protein