PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu048734.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 265aa MW: 30094 Da PI: 4.3708 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.9 | 8.2e-19 | 39 | 92 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t +q+e Le+ Fe ++++ + ++ +LAk+lgL+ rq+ +WFqNrRa++k Oeu048734.2 39 KKRRLTVDQVEFLERSFEAENTLEQGRKIQLAKELGLQPRQIGIWFQNRRARWK 92 56689************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.2 | 1.1e-38 | 38 | 128 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ +qv++LE+sFe+e++Le+ rK +la+eLglqprq+ +WFqnrRAR+ktkqlE dye+L +y++lk++ ++L ke+e+L++e+ Oeu048734.2 38 EKKRRLTVDQVEFLERSFEAENTLEQGRKIQLAKELGLQPRQIGIWFQNRRARWKTKQLEIDYETLEVSYNRLKTDYDNLLKENEKLKAEV 128 69**************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MVSFGGTGPY NSASLTVHPF DQEDNGYKYL DEYLNQPEKK RRLTVDQVEF LERSFEAENT 60 LEQGRKIQLA KELGLQPRQI GIWFQNRRAR WKTKQLEIDY ETLEVSYNRL KTDYDNLLKE 120 NEKLKAEVLV LVDNILVRDQ GDGNSPSSDN QKLPEGSRKE AISDTISEDE ESKVSMVALR 180 SEDLSSARSD EIDGPHIADA IHSSHSFKPD RSDLSQSEDN WNEELLRPAF TSSGIGDTDY 240 PGVSTNSCYF GFPVEDQAFG FWSY* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 95 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 4e-40 | HD-ZIP family protein |