PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047938.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 487aa    MW: 53965.1 Da    PI: 5.9643
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047938.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS342.95.3e-1051024791373
         GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlar.svselykal.ppsetseknsseelaalklfsevsPilkf 93 
                  l++lL+++Aea++  ++   la+ +L rl+el+sp + ++m+Rlaayf++AL+  l +  +s+++k++ ++ ++++++++++laa++l++++sP++kf
  Oeu047938.1 102 LIHLLMAAAEALTGANKCqeLARVILVRLKELVSPLDgTNMERLAAYFAKALEGLLDGaGGSGVSKKIlSVAKEEHHQQTDVLAAFQLLQDMSPYVKF 199
                  689*********997765459***********888554*******************978899999985666666667******************** PP

         GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                  +h+taNqaI eav++++rvHi+D+di++G+QW++L+qaL sR++gpp  +lRiT++++  s+  s  +++etg+rL+ fA+++g pf+f+    ++ e
  Oeu047938.1 200 GHFTANQAIIEAVAHDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPtpHLRITALSRVGSVrrSFCTVQETGRRLTAFAASIGQPFSFHQCRLDADE 297
                  *******************************************776556*********888788899************************999999* PP

         GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfdsleaklpreseerik 284
                  ++++++L++ +gEal++n++l+l ++  +    ++ + ++L+  k+l+P+++++ve+e+   +++ F+ rf+++l++ysa++dslea++p + ++r+ 
  Oeu047938.1 298 TFKPSSLKLVRGEALVINCMLHLPHFSYR---ASDSIASFLSGSKNLNPRLITLVEEEMGPtGDSGFMGRFMDSLHHYSAVYDSLEAGFPMQGRARTL 392
                  ************************99843...3334569*******************9988************************************ PP

         GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaW 373
                  vEr+++g++i+  +a    +r e      +W  +l ++GF+pv+ls  + +q klll  ++ dgyrvee  ++ lvlgWk+r+L+s+S W
  Oeu047938.1 393 VERVFIGPRISGSLARIYLARGEGDA--CSWGTWLAAVGFRPVNLSFANHCQSKLLLGLYN-DGYRVEELsNNKLVLGWKSRRLLSASIW 479
                  ********************777655..99******************************9.******86488999************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    
MAMFMDLDFS AYSYSTTTTT TTTSTEGDQG CNWNDWSQVV DWEALSGDQE DFHYLIDSMI  60
DENVVQHQPV RSVHERYNSL SPDTMMTDDE TNSTEDSKGL RLIHLLMAAA EALTGANKCQ  120
ELARVILVRL KELVSPLDGT NMERLAAYFA KALEGLLDGA GGSGVSKKIL SVAKEEHHQQ  180
TDVLAAFQLL QDMSPYVKFG HFTANQAIIE AVAHDRRVHI VDYDIMEGIQ WASLMQALVS  240
RKDGPPTPHL RITALSRVGS VRRSFCTVQE TGRRLTAFAA SIGQPFSFHQ CRLDADETFK  300
PSSLKLVRGE ALVINCMLHL PHFSYRASDS IASFLSGSKN LNPRLITLVE EEMGPTGDSG  360
FMGRFMDSLH HYSAVYDSLE AGFPMQGRAR TLVERVFIGP RISGSLARIY LARGEGDACS  420
WGTWLAAVGF RPVNLSFANH CQSKLLLGLY NDGYRVEELS NNKLVLGWKS RRLLSASIWS  480
SQDSDL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-165GRAS family protein