PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu047840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 252aa MW: 29255.6 Da PI: 5.9113 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 137 | 1.3e-42 | 5 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrF Pt+eelv++yL++k++g++ +++++vi++++iy++ PwdLp+ ++++++++w+fF++r+++ a+g r+nr t++gyWkatg+ v+ Oeu047840.1 5 LAPGFRFYPTEEELVSFYLRNKLQGTRvVDIDRVIPTLHIYDYSPWDLPQfageRCHGDQEQWFFFVPRQERVARGGRPNRLTEQGYWKATGSPCFVY 102 579***********************97888889***************656776667889************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s++++++g k+++vfy gr+p+g+kt W m+ey++ Oeu047840.1 103 SSRDRVIGKKRSMVFYAGRTPHGRKTVWKMNEYKV 137 *********************************86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
MDDQLAPGFR FYPTEEELVS FYLRNKLQGT RVVDIDRVIP TLHIYDYSPW DLPQFAGERC 60 HGDQEQWFFF VPRQERVARG GRPNRLTEQG YWKATGSPCF VYSSRDRVIG KKRSMVFYAG 120 RTPHGRKTVW KMNEYKVLEF SEASYSNAAN PQLWEELSLC RVYRKTNSLR AFERRPPPPD 180 EVVEGHQLVA AHHQNVATTS QQNHPVADAT NYSFDNSLSE VLRIANDNCD MAVDENEPGS 240 WDLEWFDFTN F* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22380.1 | 9e-69 | NAC family protein |