PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047415.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 327aa    MW: 35592.6 Da    PI: 7.692
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047415.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.8e-10239282755
                  HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++ ++RR+ri +++ +L++l+P+       K++ +++LekA+ Y+k Lq
  Oeu047415.1 239 IAAKNRRERISERLKTLQDLVPNG-----SKVDLVTMLEKAISYVKFLQ 282
                  5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MALAKDPMPN GSTLNSVQAK AFYGNNFGGS SFHASMDPSG ELHGMDEPQK TAFRENEKAG  60
VFAKNFTMSN SSSVSSPSSS NSNGLGYKVT PYLPEEARSV ISFEPEYGNF MQTGGSLLIF  120
EQSKELKMIN QQDDYSVWED NLHHNYQNQL NPKCSSTAHS LLETLGAYGS PGIGGQFGWL  180
NPEPNTHTNG IQENARQETG SSKRQITGEN TQAHKKQCSV GSKNKPKPNS TPAKDPQSIA  240
AKNRRERISE RLKTLQDLVP NGSKVDLVTM LEKAISYVKF LQLQVKVLAT DDFWPAQGGK  300
APELSQVKEA IDAILASQVD RNSSSK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.14e-59bHLH family protein