PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047294.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Nin-like
Protein Properties Length: 307aa    MW: 34922.4 Da    PI: 4.5251
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047294.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.73.5e-26128175552
       RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                  +s +++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  Oeu047294.1 128 LSRDTISQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 175
                  78899****************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MAREEYQDIF SFPTQLPSLD FSGFSANLEF QNHLPTQDSA FEPLPLMEMF LYDDPLYSSL  60
NLEPIQTQIP ENFFCGYGSS LTGFETWNPQ LLLENTNEEI TAEEPAQEEK RVKRQREMKN  120
NASNCNILSR DTISQYFYMP ITQAAKELNV GLTLLKKRCR ELGIRRWPHR KLMSLRTLIK  180
NVQELGQEEG EGKLRDAIQI LEQERKLMEE MPDIQLEDRT KRLRQACFKV NYKKRKLMAG  240
NSSMMSESKS AGPSGDNPAA AIEMNVLDCG GGRDDEDDDD GGEMQSFLSN CFSSSSDTVF  300
SGVMIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.19e-47Nin-like family protein