PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047011.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 308aa    MW: 34611.7 Da    PI: 7.6125
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047011.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.4e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv ++++ G+g+W+++++  g+ R+ k+c++rw++yl
      Oeu047011.1 14 KGPWTPEEDIILVSYIQERGPGNWRAVPSNAGLLRCSKSCRLRWNNYL 61
                     79******************************99*************7 PP
2Myb_DNA-binding47.25e-1567112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E+++++++ ++lG++ W++I ++++  Rt++++k++w+++l
      Oeu047011.1  67 RGNFTEHEEKIIIHLQELLGNR-WAAITSYLP-ERTDNDVKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGRQPCCDKL GVKKGPWTPE EDIILVSYIQ ERGPGNWRAV PSNAGLLRCS KSCRLRWNNY  60
LRPGIKRGNF TEHEEKIIIH LQELLGNRWA AITSYLPERT DNDVKNYWNT HLKKKLNKLQ  120
HGDDANIQER HSVSKSISKG QWERRLQTDI HRVKQALSEA LSLENSNNNL PDSEPFPIQT  180
STYASNTENI ARLLKDWMKN SRKSSQGGPV STQNNPSVGT SSNLSEGKMS AKTPGGHHSL  240
FSLNSDESGE AAANFTPENG VFKDEKKQDL NNQMPLTLLE KWLLDDVTTQ GEEEIVDMSL  300
GETSNLF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.12e-99MYB family protein