PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu046561.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 198aa    MW: 21245.7 Da    PI: 9.6747
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu046561.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000136385123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C++C++ Fs++  L  H++ H
  Oeu046561.1 63 FECQHCHRKFSNSQALGGHQNAH 85
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MEDNWIPRPS SSLSSEGDLC PSDQNHVNRA TSSSSVMKLF GFAVTQCAPT AIMQKHDPDN  60
KRFECQHCHR KFSNSQALGG HQNAHKKERQ RAKRIHYEHH RRGLGVTIPV INPHASRSGP  120
VISPGAPASA YGARFHATGE NCVRLPPQVL SGVPMRYPGG GGFQTDAALG GSRNNRGTSK  180
SASSTDMGDG VDVDLHL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58070.11e-13C2H2 family protein