PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu046544.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MIKC_MADS

Protein Properties

Length: 347aa MW: 38418.6 Da PI: 8.9625

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu046544.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.6	3.2e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien + rqvtfskRr g++KKAeELSvLCda+va+iifsst+kl+ey+s Oeu046544.1 9 KKIENATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTDKLFEYAS 59 68***********************************************86 PP
2	K-box	49.2	2.3e-17	92	172	19	99
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++++ L+kei + +++R+l Ge+L+ Ls++eLq+Le+ Le +l+++ +kK e ++++i++lq+k +l een++Lr+++ Oeu046544.1 92 RNHSTLRKEIAEKSHQLRRLRGEELQGLSIEELQHLESSLEAGLNRVIEKKGEKIKKEINQLQEKGMQLVEENERLRQQVI 172 56789999999999****************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MAREKIQIKK IENATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TDKLFEYASS 60 SMKEILERHN LHSKNLGKME QPSLELQLVE DRNHSTLRKE IAEKSHQLRR LRGEELQGLS 120 IEELQHLESS LEAGLNRVIE KKGEKIKKEI NQLQEKGMQL VEENERLRQQ VIEISNGRKN 180 LTSTDLENII YEEGQSLESV NINCNSTGPP QDDDSSDISL KLGLNIQDST MALHRFTYGC 240 QLGSSIQVAH GLVRKKPERA HGGAGAEPHF EVPGLALASP CGSSARDRAK KQKAASNCHK 300 IKHQLKVAVE AAGDISRLAS TGTLNSLHQA KPIEGGSGLP NSRTRL*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MAREKIQIKK IENATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TDKLFEYASS  60
SMKEILERHN LHSKNLGKME QPSLELQLVE DRNHSTLRKE IAEKSHQLRR LRGEELQGLS  120
IEELQHLESS LEAGLNRVIE KKGEKIKKEI NQLQEKGMQL VEENERLRQQ VIEISNGRKN  180
LTSTDLENII YEEGQSLESV NINCNSTGPP QDDDSSDISL KLGLNIQDST MALHRFTYGC  240
QLGSSIQVAH GLVRKKPERA HGGAGAEPHF EVPGLALASP CGSSARDRAK KQKAASNCHK  300
IKHQLKVAVE AAGDISRLAS TGTLNSLHQA KPIEGGSGLP NSRTRL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	2e-86	MIKC_MADS family protein