PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu046250.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 227aa MW: 25631.1 Da PI: 7.47 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 46 | 2.1e-14 | 43 | 98 | 40 | 95 |
GAGA_bind 40 rernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvenslasal 95 ernlalsekk a+aerdma lqrd+a+aern+a++erdn++++l+++en+++ Oeu046250.1 43 LERNLALSEKKVALAERDMAILQRDQAIAERNNAIIERDNAIATLQYRENAMSCDI 98 589***********************************************988444 PP | |||||||
2 | GAGA_bind | 261.6 | 4.6e-80 | 112 | 226 | 187 | 301 |
GAGA_bind 187 skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvD 284 k ++k++dl+ln+vs+Dest+PvP+CsCtG+lr CY+WGnGGWqS+CCttt+S+yPLP+++++r++R++grKmS+gaf+klL++La+eG+dlsnpvD Oeu046250.1 112 LKPNWKDQDLGLNQVSFDESTMPVPICSCTGVLRPCYRWGNGGWQSSCCTTTLSMYPLPAVPNKRHSRVGGRKMSGGAFNKLLSRLAGEGHDLSNPVD 209 6899********************************************************************************************** PP GAGA_bind 285 LkdhWAkHGtnkfvtir 301 LkdhWAkHGtn+++ti+ Oeu046250.1 210 LKDHWAKHGTNRYITIK 226 ****************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MDDSGHRENG RHKPPLGQVF EQHCTIPSLA WNFYFLFYFI FWLERNLALS EKKVALAERD 60 MAILQRDQAI AERNNAIIER DNAIATLQYR ENAMSCDIDV DTDDLNGQMV VLKPNWKDQD 120 LGLNQVSFDE STMPVPICSC TGVLRPCYRW GNGGWQSSCC TTTLSMYPLP AVPNKRHSRV 180 GGRKMSGGAF NKLLSRLAGE GHDLSNPVDL KDHWAKHGTN RYITIK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21240.1 | 4e-79 | BBR-BPC family protein |