PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu046167.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | WOX | ||||||||
Protein Properties | Length: 260aa MW: 30167.2 Da PI: 6.245 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.8 | 1.4e-21 | 4 | 63 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae+++ ++++l +++ ++V++WFqN++a+e++ Oeu046167.1 4 SRWNPTPEQLQTLEELYRRgTRTPSAEQIQLITSQLrrygKIEGKNVFYWFQNHKARERQ 63 7*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 114 | 7.5e-37 | 3 | 65 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq it++L++yGkie+kNVfyWFQN+kaRerqk+ Oeu046167.1 3 SSRWNPTPEQLQTLEELYRRGTRTPSAEQIQLITSQLRRYGKIEGKNVFYWFQNHKARERQKR 65 79***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MVSSRWNPTP EQLQTLEELY RRGTRTPSAE QIQLITSQLR RYGKIEGKNV FYWFQNHKAR 60 ERQKRRRQHE STSHDQPDNN GEWKESEASR TLFEAEQPKN WASPTNSSTI AEAEKAADAE 120 YKADGWLQFE ETELQQRRNL VERKNRLQMT HLSGSSSHTK LINSTHTAID PNRMKFQDFN 180 ISNHEIPWCN SVLHELQPGP YNSQCLDDCR ESETLQLFPP RSCHENESAF DKDVEVSAAA 240 TSSDFGGQYQ FFEFLPLKN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18010.1 | 7e-39 | WOX family protein |